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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11967565 chr6:167281659 A/G ARID1B chr6:157098508-157531913:+ 0.51 5.98 4.98E-9 Box Plot
BLCA rs11967565 chr6:167281659 A/G KATNA1 chr6:149916009-149970108:- 0.72 7.89 3.17E-14 Box Plot
BLCA rs11967565 chr6:167281659 A/G MED23 chr6:131895106-131949369:- 0.51 5.97 5.27E-9 Box Plot
BLCA rs11967565 chr6:167281659 A/G MRPL18 chr6:160210844-160219468:+ 0.71 7.09 6.5E-12 Box Plot
BLCA rs11967565 chr6:167281659 A/G PCMT1 chr6:150070579-150132556:+ 0.64 7.47 5.48E-13 Box Plot
BLCA rs11967565 chr6:167281659 A/G PSMB1 chr6:170844205-170862429:- 0.53 6.02 4.12E-9 Box Plot
BLCA rs11967565 chr6:167281659 A/G TBP chr6:170863390-170881958:+ 0.71 7.24 2.45E-12 Box Plot
BLCA rs11967565 chr6:167281659 A/G TCP1 chr6:160199530-160210781:- 0.69 7.68 1.37E-13 Box Plot
BLCA rs11967565 chr6:167281659 A/G VTA1 chr6:142468299-142545826:+ 0.63 6.12 2.27E-9 Box Plot
BLCA rs11967565 chr6:167281659 A/G WTAP chr6:160146617-160177351:+ 0.76 7.52 4.03E-13 Box Plot
BLCA rs11970804 chr7:65765 G/T TMEM205 chr19:11453452-11457194:- -0.33 -6.09 2.79E-9 Box Plot
BLCA rs11986049 chr8:27015763 A/G AGPAT5 chr8:6565878-6617187:+ 0.58 6.06 3.29E-9 Box Plot
BLCA rs11986049 chr8:27015763 A/G CHMP7 chr8:23101150-23119513:+ 0.6 6.36 5.79E-10 Box Plot
BLCA rs11986049 chr8:27015763 A/G CLN8 chr8:1703944-1749877:+ 0.67 6.5 2.47E-10 Box Plot
BLCA rs11986049 chr8:27015763 A/G CNOT7 chr8:17082473-17104387:- 0.67 6.9 2.2E-11 Box Plot